Exchange Server 2016 CU23 – October 2025 Security Update (KB5066369) Gotcha

Date of incident: November 16, 2025 Affected build: 15.01.2507.61 (October 14, 2025 SU)

What happened

I ran the routine security update Exchange2016-KB5066369-x64-en.exe on our last remaining Exchange 2016 server (CU23). The patch applied cleanly, took ~30 minutes, reported no errors, and requested a reboot.

After the reboot:

Root cause

The update process (or possibly cleanup of old certificates I did shortly before) removed the binding of the self-signed Microsoft Exchange certificate from the Exchange Back End site on port 444. Without a valid certificate bound to the backend HTTPS site, all Client Access Frontend-to-Backend communication fails ? total outage.

TL;DR: The October 2025 SU for Exchange 2016 can unbind the self-signed certificate from the Exchange Back End site (port 444). This instantly kills OWA, ECP, EMS, and mail flow.

Quick fix (5 minutes once you know)

  1. Open IIS Manager on the Exchange server
  2. Go to Sites ? Exchange Back End ? Bindings
  3. Edit the https binding on port 444
  4. Select the current (or newly created) self-signed certificate named Microsoft Exchange
  5. OK ? Close
  6. Run iisreset /noforce

Everything comes back immediately – no reboot required.

Prevention for the future

Final note

Exchange 2016 reached end-of-support on October 14, 2025. This was the very last security update Microsoft will ever release for it. It took me many frustrating hours and multiple dead ends (including 3+ hours with another AI) until Grok pointed me straight to the backend certificate within minutes.

Hope this saves the next admin a massive headache.